Assays

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7 Assays matching the given criteria: (Clear all filters)

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FBPAase model

SulfoSys

Mathematical model for FBPAase kinetics, saturation of GAP and DHAP

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: FBPAase kinetic model

SOPs: No SOPs

Data files: FBPA/ase kinetics DHAP, FBPA/ase kinetics GAP, Model simulation and experimental data for DHAP...

Snapshots: No snapshots

Created: 1st Feb 2013 at 21:47, Last updated: 26th Oct 2017 at 09:57

PGK modeling

SulfoSys

Mathematical model for PGK kinetics, saturation with ADP, ATP, 3PG and BPG.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: 1 hidden item

SOPs: No SOPs

Data files: Model simulation and experimental data for ADP,..., PGK kinetics 3PG, PGK kinetics ADP, PGK kinetics ATP, PGK kinetics BPG

Snapshots: No snapshots

Created: 1st Feb 2013 at 22:44, Last updated: 26th Oct 2017 at 09:57

GAPDH modeling

SulfoSys

Mathematical model for GAPDH kinetics, saturation of GAP, BPG, NADP, NADPH and Pi.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: GAPDH kinetic model

SOPs: No SOPs

Data files: GAPDH kinetics 3PG, GAPDH kinetics GAP, GAPDH kinetics NADP, GAPDH kinetics NADPH, GAPDH kinetics Pi and 1 hidden item

Snapshots: No snapshots

Created: 1st Feb 2013 at 23:11, Last updated: 26th Oct 2017 at 09:57

TPI modeling

SulfoSys

Mathematical model for TPI kinetics, saturation of GAP and DHAP.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: TIM kinetic model

SOPs: No SOPs

Data files: Model simulation and exp data for TIM kinetics,..., TPI kinetics DHAP, TPI kinetics GAP, TPI kinetics PEP inhibition GAP, TPI kinetics PEP inhibition of DHAP

Snapshots: No snapshots

Created: 1st Feb 2013 at 23:26, Last updated: 26th Oct 2017 at 09:57

Gluconeogenic model

SulfoSys

Mathematical model for the analysis of carbon loss of BPG, GAP and DHAP in reconstituted system of S. solfataricus at 70C.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: Mathematical model for the combined four enzyme...

SOPs: No SOPs

Data files: Metabolite concentrations during reconstituted ...

Snapshots: No snapshots

Created: 2nd Feb 2013 at 13:21, Last updated: 26th Oct 2017 at 09:57

Model reconstituted system

SulfoSys

Mathematical model for the reconstituted system with PGK, GAPDH, TPI and FBPAase.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Carbon loss at high T

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: Mathematical model for the combined four enzyme...

SOPs: No SOPs

Data files: Metabolite concentrations during reconstituted ..., Model simulation and Exp data for reconstituted...

Snapshots: No snapshots

Created: 2nd Feb 2013 at 16:32, Last updated: 26th Oct 2017 at 09:57

Modelling pathway optimisation

SulfoSys

Varying the relative amounts of PGK and FBPAase and analyse the 3PG uptake and F6P production rates.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Pathway optimisation

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: Mathematical model for the combined four enzyme...

SOPs: No SOPs

Data files: FBPAase titration of reconstituted system, Model simulation and experimental data for PGK ..., PGK titration of reconstituted system, Pathway efficiency for 3PG to F6P conversion as...

Snapshots: No snapshots

Created: 3rd Feb 2013 at 09:56, Last updated: 26th Oct 2017 at 09:57

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