Assays

The temperature dependent degradation of DHAP and GAP is modelled as an exponential decay process using experimental data for the disintegration at 70C.

Submitter: Jacky Snoep

Biological problem addressed: Metabolism

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: No organisms

Models: DHAP T degradation, GAP T degradation

SOPs: No SOPs

Data files: Model simulation and Exp data for DHAP T deg, Model simulation and Exp data for GAP T deg, T degradation DHAP, T degradation GAP

Snapshots: No snapshots

Created: 29th Jan 2013 at 21:05, Last updated: 26th Oct 2017 at 09:57

FBPAase model

SulfoSys

Mathematical model for FBPAase kinetics, saturation of GAP and DHAP

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: FBPAase kinetic model

SOPs: No SOPs

Data files: FBPA/ase kinetics DHAP, FBPA/ase kinetics GAP, Model simulation and experimental data for DHAP...

Snapshots: No snapshots

Created: 1st Feb 2013 at 21:47, Last updated: 26th Oct 2017 at 09:57

PGK modeling

SulfoSys

Mathematical model for PGK kinetics, saturation with ADP, ATP, 3PG and BPG.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: 1 hidden item

SOPs: No SOPs

Data files: Model simulation and experimental data for ADP,..., PGK kinetics 3PG, PGK kinetics ADP, PGK kinetics ATP, PGK kinetics BPG

Snapshots: No snapshots

Created: 1st Feb 2013 at 22:44, Last updated: 26th Oct 2017 at 09:57

GAPDH modeling

SulfoSys

Mathematical model for GAPDH kinetics, saturation of GAP, BPG, NADP, NADPH and Pi.

Submitter: Jacky Snoep

Biological problem addressed: Model Analysis Type

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Study: Model gluconeogenesis

Organisms: Sulfolobus solfataricus : P2 (wild-type / wild-type)

Models: GAPDH kinetic model

SOPs: No SOPs

Data files: GAPDH kinetics 3PG, GAPDH kinetics GAP, GAPDH kinetics NADP, GAPDH kinetics NADPH, GAPDH kinetics Pi and 1 hidden item

Snapshots: No snapshots

Created: 1st Feb 2013 at 23:11, Last updated: 26th Oct 2017 at 09:57

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